birch-beer alternatives and similar packages

Based on the "Bioinformatics" category.
Alternatively, view birch-beer alternatives based on common mentions on social networks and blogs.

too-many-cells

9.1 3.6 birch-beer VS too-many-cells

Cluster single cells and analyze cell clade relationships with colorful visualizations.
hyraxAbif

6.3 0.0 birch-beer VS hyraxAbif

DISCONTINUED. ABIF parser, writer and generator

InfluxDB – Built for High-Performance Time Series Workloads

InfluxDB 3 OSS is now GA. Transform, enrich, and act on time series data directly in the database. Automate critical tasks and eliminate the need to move data externally. Download now.

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elynx-seq

5.1 5.1 birch-beer VS elynx-seq

Analyze, modify and simulate molecular sequence data and phylogenetic trees in a reproducible way.
hierarchical-spectral-clustering

4.6 0.0 birch-beer VS hierarchical-spectral-clustering

Hierarchical spectral clustering of a graph.
BiobaseHTTP

4.4 0.0 birch-beer VS BiobaseHTTP

Haskell cabal libary for submission and result retrieval from the NCBI Entrez REST webservice
zsyntax

3.1 6.6 birch-beer VS zsyntax

Automated theorem prover for a linear logic-based calculus for molecular biology.
modularity

2.8 0.0 birch-beer VS modularity

Find the modularity of a network.
BiobaseEnsembl

2.7 0.0 birch-beer VS BiobaseEnsembl

Ensembl related functions and datastructures
integreat

2.5 0.0 birch-beer VS integreat

Integrate difference data sources and optionally perform differential integration.
differential

2.4 0.0 birch-beer VS differential

Finds out whether an entity comes from different distributions (statuses).
tex-join-bib

1.2 0.0 birch-beer VS tex-join-bib

Compile separate tex files with the same bibliography.
heatitup-complete

1.2 0.0 birch-beer VS heatitup-complete

Find and annotate ITDs with assembly or read pair joining using suffix trees and characterize the exogenous segments within the spacer using heat diffusion. A layer on top of heatitup for additional functionality such as working with BAM files directly.
ViennaRNA-extras

1.2 0.0 birch-beer VS ViennaRNA-extras

ViennaRNA v2 extensions in Haskell
subsample

1.1 0.0 birch-beer VS subsample

Subsample data from a uniform distribution so two different statuses for the same entity have the same number of samples.
collapse-duplication

1.1 0.0 birch-beer VS collapse-duplication

Process the output of heatitup in order to collapse sequences into clones by similar ITD mutations.
normalize

1.1 0.0 birch-beer VS normalize

normalize
pipes-ordered-zip

- - birch-beer VS pipes-ordered-zip

DISCONTINUED. merge two ordered Producers into a new Producer
heatitup

- - birch-beer VS heatitup

DISCONTINUED. Find and annotate ITDs.