birch-beer alternatives and similar packages

Based on the "Bioinformatics" category.
Alternatively, view birch-beer alternatives based on common mentions on social networks and blogs.

too-many-cells

9.1 4.5 birch-beer VS too-many-cells

Cluster single cells and analyze cell clade relationships with colorful visualizations.
hyraxAbif

6.3 0.0 birch-beer VS hyraxAbif

DISCONTINUED. ABIF parser, writer and generator

InfluxDB - Purpose built for real-time analytics at any scale.

InfluxDB Platform is powered by columnar analytics, optimized for cost-efficient storage, and built with open data standards.

Promo www.influxdata.com

BiobaseHTTP

4.9 0.0 birch-beer VS BiobaseHTTP

Haskell cabal libary for submission and result retrieval from the NCBI Entrez REST webservice
elynx-seq

4.8 4.9 birch-beer VS elynx-seq

Analyze, modify and simulate molecular sequence data and phylogenetic trees in a reproducible way.
hierarchical-spectral-clustering

4.8 0.0 birch-beer VS hierarchical-spectral-clustering

Hierarchical spectral clustering of a graph.
zsyntax

3.8 6.6 birch-beer VS zsyntax

Automated theorem prover for a linear logic-based calculus for molecular biology.
modularity

3.3 0.0 birch-beer VS modularity

Find the modularity of a network.
integreat

3.1 0.0 birch-beer VS integreat

Integrate difference data sources and optionally perform differential integration.
BiobaseEnsembl

3.1 0.0 birch-beer VS BiobaseEnsembl

Ensembl related functions and datastructures
differential

2.8 0.0 birch-beer VS differential

Finds out whether an entity comes from different distributions (statuses).
ViennaRNA-extras

1.9 0.0 birch-beer VS ViennaRNA-extras

ViennaRNA v2 extensions in Haskell
subsample

1.6 0.0 birch-beer VS subsample

Subsample data from a uniform distribution so two different statuses for the same entity have the same number of samples.
normalize

1.6 0.0 birch-beer VS normalize

normalize
collapse-duplication

1.6 0.0 birch-beer VS collapse-duplication

Process the output of heatitup in order to collapse sequences into clones by similar ITD mutations.
tex-join-bib

1.6 0.0 birch-beer VS tex-join-bib

Compile separate tex files with the same bibliography.
heatitup-complete

1.6 0.0 birch-beer VS heatitup-complete

Find and annotate ITDs with assembly or read pair joining using suffix trees and characterize the exogenous segments within the spacer using heat diffusion. A layer on top of heatitup for additional functionality such as working with BAM files directly.
pipes-ordered-zip

- - birch-beer VS pipes-ordered-zip

DISCONTINUED. merge two ordered Producers into a new Producer
heatitup

- - birch-beer VS heatitup

DISCONTINUED. Find and annotate ITDs.