birch-beer alternatives and similar packages

Based on the "Bioinformatics" category.
Alternatively, view birch-beer alternatives based on common mentions on social networks and blogs.

• too-many-cells

  9.0 0.0 birch-beer VS too-many-cells

  Cluster single cells and analyze cell clade relationships with colorful visualizations.

• hyraxAbif

  6.1 0.0 birch-beer VS hyraxAbif

  ABIF parser, writer and generator
  

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• BiobaseHTTP

  5.1 0.0 birch-beer VS BiobaseHTTP

  Haskell cabal libary for submission and result retrieval from the NCBI Entrez REST webservice

• elynx-seq

  4.9 0.0 birch-beer VS elynx-seq

  Analyze, modify and simulate molecular sequence data and phylogenetic trees in a reproducible way.

• hierarchical-spectral-clustering

  4.8 0.0 birch-beer VS hierarchical-spectral-clustering

  Hierarchical spectral clustering of a graph.

• zsyntax

  3.8 0.0 birch-beer VS zsyntax

  Automated theorem prover for a linear logic-based calculus for molecular biology.

• modularity

  3.7 0.0 birch-beer VS modularity

  Find the modularity of a network.

• BiobaseEnsembl

  3.4 0.0 birch-beer VS BiobaseEnsembl

  Ensembl related functions and datastructures

• differential

  3.1 0.0 birch-beer VS differential

  Finds out whether an entity comes from different distributions (statuses).

• integreat

  2.6 0.0 birch-beer VS integreat

  Integrate difference data sources and optionally perform differential integration.

• ViennaRNA-extras

  2.1 0.0 birch-beer VS ViennaRNA-extras

  ViennaRNA v2 extensions in Haskell

• subsample

  1.9 0.0 birch-beer VS subsample

  Subsample data from a uniform distribution so two different statuses for the same entity have the same number of samples.

• heatitup-complete

  1.9 0.0 birch-beer VS heatitup-complete

  Find and annotate ITDs with assembly or read pair joining using suffix trees and characterize the exogenous segments within the spacer using heat diffusion. A layer on top of heatitup for additional functionality such as working with BAM files directly.

• collapse-duplication

  1.9 0.0 birch-beer VS collapse-duplication

  Process the output of heatitup in order to collapse sequences into clones by similar ITD mutations.

• tex-join-bib

  1.9 0.0 birch-beer VS tex-join-bib

  Compile separate tex files with the same bibliography.

• normalize

  1.2 0.0 birch-beer VS normalize

  normalize

• pipes-ordered-zip

  - - birch-beer VS pipes-ordered-zip

  merge two ordered Producers into a new Producer

• heatitup

  - - birch-beer VS heatitup

  Find and annotate ITDs.

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Popular Comparisons

• normalize
  vs
  collapse-duplication

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