collapse-duplication alternatives and similar packages

Based on the "Bioinformatics" category.
Alternatively, view collapse-duplication alternatives based on common mentions on social networks and blogs.

• too-many-cells

  9.0 0.0 collapse-duplication VS too-many-cells

  Cluster single cells and analyze cell clade relationships with colorful visualizations.

• hyraxAbif

  6.2 0.0 collapse-duplication VS hyraxAbif

  ABIF parser, writer and generator
  

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• elynx-seq

  5.1 0.0 collapse-duplication VS elynx-seq

  Analyze, modify and simulate molecular sequence data and phylogenetic trees in a reproducible way.

• BiobaseHTTP

  4.9 0.0 collapse-duplication VS BiobaseHTTP

  Haskell cabal libary for submission and result retrieval from the NCBI Entrez REST webservice

• birch-beer

  4.4 0.0 collapse-duplication VS birch-beer

  Generate a tree for displaying a hierarchy of groups with colors, scaling, and more.

• hierarchical-spectral-clustering

  4.4 0.0 collapse-duplication VS hierarchical-spectral-clustering

  Hierarchical spectral clustering of a graph.

• zsyntax

  3.9 0.0 collapse-duplication VS zsyntax

  Automated theorem prover for a linear logic-based calculus for molecular biology.

• modularity

  3.1 0.0 collapse-duplication VS modularity

  Find the modularity of a network.

• BiobaseEnsembl

  2.8 0.0 collapse-duplication VS BiobaseEnsembl

  Ensembl related functions and datastructures

• integreat

  2.8 0.0 collapse-duplication VS integreat

  Integrate difference data sources and optionally perform differential integration.

• differential

  2.5 0.0 collapse-duplication VS differential

  Finds out whether an entity comes from different distributions (statuses).

• ViennaRNA-extras

  2.4 0.0 collapse-duplication VS ViennaRNA-extras

  ViennaRNA v2 extensions in Haskell

• normalize

  1.3 0.0 collapse-duplication VS normalize

  normalize

• subsample

  1.3 0.0 collapse-duplication VS subsample

  Subsample data from a uniform distribution so two different statuses for the same entity have the same number of samples.

• heatitup-complete

  1.3 0.0 collapse-duplication VS heatitup-complete

  Find and annotate ITDs with assembly or read pair joining using suffix trees and characterize the exogenous segments within the spacer using heat diffusion. A layer on top of heatitup for additional functionality such as working with BAM files directly.

• tex-join-bib

  1.3 0.0 collapse-duplication VS tex-join-bib

  Compile separate tex files with the same bibliography.

• pipes-ordered-zip

  - - collapse-duplication VS pipes-ordered-zip

  merge two ordered Producers into a new Producer

• heatitup

  - - collapse-duplication VS heatitup

  Find and annotate ITDs.

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Popular Comparisons

• collapse-duplication
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  normalize
• normalize
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  collapse-duplication

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