collapse-duplication alternatives and similar packages

Based on the "Bioinformatics" category.
Alternatively, view collapse-duplication alternatives based on common mentions on social networks and blogs.

• too-many-cells

  9.1 3.6 collapse-duplication VS too-many-cells

  Cluster single cells and analyze cell clade relationships with colorful visualizations.
  

• hyraxAbif

  6.3 0.0 collapse-duplication VS hyraxAbif

  DISCONTINUED. ABIF parser, writer and generator
  

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• elynx-seq

  5.1 5.1 collapse-duplication VS elynx-seq

  Analyze, modify and simulate molecular sequence data and phylogenetic trees in a reproducible way.
  

• hierarchical-spectral-clustering

  4.6 0.0 collapse-duplication VS hierarchical-spectral-clustering

  Hierarchical spectral clustering of a graph.
  

• BiobaseHTTP

  4.4 0.0 collapse-duplication VS BiobaseHTTP

  Haskell cabal libary for submission and result retrieval from the NCBI Entrez REST webservice
  

• birch-beer

  3.7 0.0 collapse-duplication VS birch-beer

  Generate a tree for displaying a hierarchy of groups with colors, scaling, and more.
  

• zsyntax

  3.1 6.6 collapse-duplication VS zsyntax

  Automated theorem prover for a linear logic-based calculus for molecular biology.
  

• modularity

  2.8 0.0 collapse-duplication VS modularity

  Find the modularity of a network.
  

• differential

  2.8 0.0 collapse-duplication VS differential

  Finds out whether an entity comes from different distributions (statuses).
  

• BiobaseEnsembl

  2.7 0.0 collapse-duplication VS BiobaseEnsembl

  Ensembl related functions and datastructures
  

• integreat

  2.5 0.0 collapse-duplication VS integreat

  Integrate difference data sources and optionally perform differential integration.
  

• tex-join-bib

  1.2 0.0 collapse-duplication VS tex-join-bib

  Compile separate tex files with the same bibliography.
  

• heatitup-complete

  1.2 0.0 collapse-duplication VS heatitup-complete

  Find and annotate ITDs with assembly or read pair joining using suffix trees and characterize the exogenous segments within the spacer using heat diffusion. A layer on top of heatitup for additional functionality such as working with BAM files directly.
  

• ViennaRNA-extras

  1.2 0.0 collapse-duplication VS ViennaRNA-extras

  ViennaRNA v2 extensions in Haskell
  

• subsample

  1.1 0.0 collapse-duplication VS subsample

  Subsample data from a uniform distribution so two different statuses for the same entity have the same number of samples.
  

• normalize

  1.1 0.0 collapse-duplication VS normalize

  normalize
  

• heatitup

  - - collapse-duplication VS heatitup

  DISCONTINUED. Find and annotate ITDs.

• pipes-ordered-zip

  - - collapse-duplication VS pipes-ordered-zip

  DISCONTINUED. merge two ordered Producers into a new Producer

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Popular Comparisons

• collapse-duplication
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  normalize
• normalize
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  collapse-duplication
• hierarchical-spectral-clustering
  vs
  pipes-ordered-zip

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