Popularity
2.2
Declining
Activity
0.0
Stable
2
3
0
Monthly Downloads: 4
Programming language: Haskell
License: BSD 3-clause "New" or "Revised" License
Latest version: v0.0.0.1
Forestry alternatives and similar packages
Based on the "Bioinformatics" category.
Alternatively, view Forestry alternatives based on common mentions on social networks and blogs.
-
cobot
Computational biology toolkit to collaborate with researchers in constructive protein engineering -
bioinformatics-toolkit
A collection of bioinformatics algorithms -
BlastHTTP
Haskell cabal libary for submission and result retrieval from the NCBI Blast REST webservice -
FormalGrammars
Context-free and linear grammars in Haskell (parsing, pretty-printing, embedded DSL) -
EntrezHTTP
Haskell cabal libary for submission and result retrieval from the NCBI Entrez REST webservice -
SelectSequencesFromMSA
Tool to select representative sequences from a multiple sequence alignment -
Taxonomy
Haskell cabal Taxonomy libary contains tools, parsers, datastructures and visualisation for the NCBI (National Center for Biotechnology Information) Taxonomy datasources. -
BioHMM
Libary containing parsing and visualisation functions and datastructures for Hidden Markov Models in HMMER3 format. -
StockholmAlignment
Libary containing parsing and visualisation functions and datastructures for Stockholm aligmnent format. -
ADPfusionForest
Dynamic programming on tree and forest structures -
rank-product
Collects the functions pertaining to finding the rank product of a data set as well as the associated p-value.
WorkOS - The modern identity platform for B2B SaaS
The APIs are flexible and easy-to-use, supporting authentication, user identity, and complex enterprise features like SSO and SCIM provisioning.
Promo
workos.com
Do you think we are missing an alternative of Forestry or a related project?
README
Forestry: Science and craft of forests
This library provides linear and affine tree alignment algorithms. In addition, a very simple program @RNAforestry@ is provided. This program mimics @RNAforester@.
Contact
Christian Hoener zu Siederdissen
Leipzig University, Leipzig, Germany
[email protected]
http://www.bioinf.uni-leipzig.de/~choener/