Monthly Downloads: 32
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License: BSD 3-clause "New" or "Revised" License
Tags:
Bioinformatics
pipes-ordered-zip alternatives and similar packages
Based on the "Bioinformatics" category.
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too-many-cells
Cluster single cells and analyze cell clade relationships with colorful visualizations. -
BiobaseHTTP
Haskell cabal libary for submission and result retrieval from the NCBI Entrez REST webservice -
elynx-seq
Analyze, modify and simulate molecular sequence data and phylogenetic trees in a reproducible way. -
hierarchical-spectral-clustering
Hierarchical spectral clustering of a graph. -
birch-beer
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Automated theorem prover for a linear logic-based calculus for molecular biology. -
integreat
Integrate difference data sources and optionally perform differential integration. -
BiobaseEnsembl
Ensembl related functions and datastructures -
differential
Finds out whether an entity comes from different distributions (statuses). -
heatitup-complete
Find and annotate ITDs with assembly or read pair joining using suffix trees and characterize the exogenous segments within the spacer using heat diffusion. A layer on top of heatitup for additional functionality such as working with BAM files directly. -
subsample
Subsample data from a uniform distribution so two different statuses for the same entity have the same number of samples. -
collapse-duplication
Process the output of heatitup in order to collapse sequences into clones by similar ITD mutations. -
tex-join-bib
Compile separate tex files with the same bibliography.
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