Popularity
2.2
Declining
Activity
0.0
Stable
2
3
0
Monthly Downloads: 3
Programming language: Haskell
License: BSD 3-clause "New" or "Revised" License
Latest version: v0.0.0.1
Forestry alternatives and similar packages
Based on the "Bioinformatics" category.
Alternatively, view Forestry alternatives based on common mentions on social networks and blogs.
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cobot
Computational biology toolkit to collaborate with researchers in constructive protein engineering -
BlastHTTP
Haskell cabal libary for submission and result retrieval from the NCBI Blast REST webservice -
EntrezHTTP
Haskell cabal libary for submission and result retrieval from the NCBI Entrez REST webservice -
Taxonomy
Haskell cabal Taxonomy libary contains tools, parsers, datastructures and visualisation for the NCBI (National Center for Biotechnology Information) Taxonomy datasources. -
BioHMM
Libary containing parsing and visualisation functions and datastructures for Hidden Markov Models in HMMER3 format. -
StockholmAlignment
Libary containing parsing and visualisation functions and datastructures for Stockholm aligmnent format. -
rank-product
Collects the functions pertaining to finding the rank product of a data set as well as the associated p-value.
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Do you think we are missing an alternative of Forestry or a related project?
README
Forestry: Science and craft of forests
This library provides linear and affine tree alignment algorithms. In addition, a very simple program @RNAforestry@ is provided. This program mimics @RNAforester@.
Contact
Christian Hoener zu Siederdissen
Leipzig University, Leipzig, Germany
[email protected]
http://www.bioinf.uni-leipzig.de/~choener/