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Monthly Downloads: 65
Programming language: Haskell
License: GNU General Public License v3.0 only
Latest version: v1.0.5

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README

SelectSequencesFromMSA GitHub Build Status Hackage Bioconda

SelectSequences is a tool for selection of a represenative subset of sequences from a multiple sequence alignment in clustal format. It is inspired the SelectSequences.pl script provided by RNAz.

It is available as a commandline tool only.

Installation via bioconda

SelectSequences can be installed with all dependencies via conda. Once you have conda installed simply type:

     conda install -c bioconda selectsequences

Available as docker container

SelectSequences is available with all dependencies via biocontainer. Install docker

     docker pull quay.io/biocontainers/selectsequences:1.0.0--pl5.22.0_0
     docker run -i -t quay.io/biocontainers/selectsequences:1.0.0--pl5.22.0_0 bash

Installation via cabal-install

SelectSequences is implemented in Haskell and can be installed via the Haskell package distribution sytem cabal. Once you have cabal installed simply type:

     cabal install SelectSequences

### Precompiled Executables

*   Archlinux (ghc-8.0.1) [SelectSequences 1.0.0 x86_64](http://www.bioinf.uni-freiburg.de//~egg/SelectSequences/archlinux-ghc8.0.1/SelectSequences-1.0.0)