zsyntax alternatives and similar packages

Based on the "Bioinformatics" category.
Alternatively, view zsyntax alternatives based on common mentions on social networks and blogs.

too-many-cells

9.1 3.6 zsyntax VS too-many-cells

Cluster single cells and analyze cell clade relationships with colorful visualizations.
hyraxAbif

6.3 0.0 zsyntax VS hyraxAbif

DISCONTINUED. ABIF parser, writer and generator

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InfluxDB 3 OSS is now GA. Transform, enrich, and act on time series data directly in the database. Automate critical tasks and eliminate the need to move data externally. Download now.

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elynx-seq

5.1 5.1 zsyntax VS elynx-seq

Analyze, modify and simulate molecular sequence data and phylogenetic trees in a reproducible way.
BiobaseHTTP

4.8 0.0 zsyntax VS BiobaseHTTP

Haskell cabal libary for submission and result retrieval from the NCBI Entrez REST webservice
hierarchical-spectral-clustering

4.6 0.0 zsyntax VS hierarchical-spectral-clustering

Hierarchical spectral clustering of a graph.
birch-beer

3.7 0.0 zsyntax VS birch-beer

Generate a tree for displaying a hierarchy of groups with colors, scaling, and more.
modularity

2.8 0.0 zsyntax VS modularity

Find the modularity of a network.
BiobaseEnsembl

2.7 0.0 zsyntax VS BiobaseEnsembl

Ensembl related functions and datastructures
integreat

2.5 0.0 zsyntax VS integreat

Integrate difference data sources and optionally perform differential integration.
differential

2.4 0.0 zsyntax VS differential

Finds out whether an entity comes from different distributions (statuses).
tex-join-bib

1.2 0.0 zsyntax VS tex-join-bib

Compile separate tex files with the same bibliography.
heatitup-complete

1.2 0.0 zsyntax VS heatitup-complete

Find and annotate ITDs with assembly or read pair joining using suffix trees and characterize the exogenous segments within the spacer using heat diffusion. A layer on top of heatitup for additional functionality such as working with BAM files directly.
ViennaRNA-extras

1.2 0.0 zsyntax VS ViennaRNA-extras

ViennaRNA v2 extensions in Haskell
normalize

1.1 0.0 zsyntax VS normalize

normalize
subsample

1.1 0.0 zsyntax VS subsample

Subsample data from a uniform distribution so two different statuses for the same entity have the same number of samples.
collapse-duplication

1.1 0.0 zsyntax VS collapse-duplication

Process the output of heatitup in order to collapse sequences into clones by similar ITD mutations.
pipes-ordered-zip

- - zsyntax VS pipes-ordered-zip

DISCONTINUED. merge two ordered Producers into a new Producer
heatitup

- - zsyntax VS heatitup

DISCONTINUED. Find and annotate ITDs.