zsyntax alternatives and similar packages

Based on the "Bioinformatics" category.
Alternatively, view zsyntax alternatives based on common mentions on social networks and blogs.

• too-many-cells

  8.7 4.6 zsyntax VS too-many-cells

  Cluster single cells and analyze cell clade relationships with colorful visualizations.

• hyraxAbif

  6.2 0.0 zsyntax VS hyraxAbif

  ABIF parser, writer and generator
  

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• BiobaseHTTP

  4.6 0.0 zsyntax VS BiobaseHTTP

  Haskell cabal libary for submission and result retrieval from the NCBI Entrez REST webservice

• birch-beer

  4.1 1.9 zsyntax VS birch-beer

  Generate a tree for displaying a hierarchy of groups with colors, scaling, and more.

• hierarchical-spectral-clustering

  3.8 0.0 zsyntax VS hierarchical-spectral-clustering

  Hierarchical spectral clustering of a graph.

• elynx-seq

  2.9 9.0 zsyntax VS elynx-seq

  Analyze, modify and simulate molecular sequence data and phylogenetic trees in a reproducible way.

• modularity

  2.6 0.0 zsyntax VS modularity

  Find the modularity of a network.

• BiobaseEnsembl

  2.3 0.0 zsyntax VS BiobaseEnsembl

  Ensembl related functions and datastructures

• differential

  2.0 0.0 zsyntax VS differential

  Finds out whether an entity comes from different distributions (statuses).

• integreat

  2.0 0.0 zsyntax VS integreat

  Integrate difference data sources and optionally perform differential integration.

• tex-join-bib

  0.9 0.0 zsyntax VS tex-join-bib

  Compile separate tex files with the same bibliography.

• collapse-duplication

  0.9 0.0 zsyntax VS collapse-duplication

  Process the output of heatitup in order to collapse sequences into clones by similar ITD mutations.

• heatitup-complete

  0.9 0.0 zsyntax VS heatitup-complete

  Find and annotate ITDs with assembly or read pair joining using suffix trees and characterize the exogenous segments within the spacer using heat diffusion. A layer on top of heatitup for additional functionality such as working with BAM files directly.

• normalize

  0.9 0.0 zsyntax VS normalize

  normalize

• subsample

  0.9 0.0 zsyntax VS subsample

  Subsample data from a uniform distribution so two different statuses for the same entity have the same number of samples.

• ViennaRNA-extras

  0.9 0.0 zsyntax VS ViennaRNA-extras

  ViennaRNA v2 extensions in Haskell

• pipes-ordered-zip

  - - zsyntax VS pipes-ordered-zip

  merge two ordered Producers into a new Producer

• heatitup

  - - zsyntax VS heatitup

  Find and annotate ITDs.

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