10

8

6

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18 Bioinformatics packages and projects

  • too-many-cells

    6.2 7.3 Haskell
    Cluster single cells and analyze cell clade relationships.
  • hyraxAbif

    5.5 3.4 Haskell
    Modules for parsing, generating and manipulating AB1 files.
  • zsyntax

    3.8 0.0 Haskell
    Automated theorem prover for the Zsyntax biochemical calculus
  • hierarchical-spectral-clustering

    3.8 5.3 Haskell
    Hierarchical spectral clustering of a graph.
  • birch-beer

    2.8 6.0 Haskell
    Plot a colorful tree.
  • differential

    2.4 1.7 Haskell
    Finds out whether an entity comes from different distributions (statuses).
  • modularity

    2.4 2.4 Haskell
    Find the modularity of a network.
  • integreat

    2.4 0.0 Haskell
    Integrate different assays.
  • heatitup-complete

    1.0 1.7 Haskell
    Find and annotate ITDs with assembly or read pair joining.
  • subsample

    1.0 0.0 Haskell
    Subsample data.
  • normalize

    1.0 0.0 Haskell
    Normalize data using a variety of methods.
  • elynx-seq

    1.0 9.0 Haskell
    Handle molecular sequences
  • collapse-duplication

    1.0 0.7 Haskell
    Collapse the duplication output into clones and return their frequencies.
  • ViennaRNA-extras

    0.8 0.0 Haskell
    ViennaRNA v2 extensions
  • pipes-ordered-zip

    - -
    merge two ordered Producers into a new Producer
  • BiobaseHTTP

    - -
    Libary to interface with the Bioinformatics HTTP services - Entrez Ensembl
  • BiobaseEnsembl

    - -
    Ensembl related datastructures and functions
  • heatitup

    - -
    Find and annotate ITDs.

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