Haskell Specific Industries Bioinformatics

25 Bioinformatics packages and projects

• hemokit

  8.6 0.0 Haskell

  Haskell port of the Emokit EEG project

• samtools

  6.9 0.0 C

  Binding to the C samtools library

• RNAlien

  5.7 6.3 Haskell

  Unsupervized construction of RNA family models

• hPDB

  5.7 0.0 Haskell

  Protein Databank file format library

• Genbank

  4.9 1.0 Haskell

  Libary for processing the NCBI genbank format

• vcf

  4.7 3.5 Haskell

  A package to parse VCF files inspired in similar python libraries

• BlastHTTP

  4.4 1.3 Haskell

  Libary to interface with the NCBI blast REST interface

• phybin

  4.4 0.0 Haskell

  ...

• EntrezHTTP

  4.4 3.3 Haskell

  Libary to interface with the NCBI Entrez REST service.

• bioinformatics-toolkit

  3.7 4.3 Haskell

  A collection of bioinformatics tools

• FormalGrammars

  2.4 2.6 Haskell

  (Context-free) grammars in formal language theory

• TaxonomyTools

  2.4 1.5 Haskell

  Tool for parsing, processing, comparing and visualizing taxonomy data

• cmv

  2.4 8.8 Haskell

  Detailed visualization of CMs, HMMs and their comparisions

• Taxonomy

  2.4 4.6 Haskell

  Libary for parsing, processing and vizualization of taxonomy data

• BioHMM

  1.9 7.0 Haskell

  Libary for Hidden Markov Models in HMMER3 format.

• seqloc

  1.9 0.0 Haskell

  Handle sequence locations for bioinformatics

• SelectSequencesFromMSA

  1.9 4.4 Haskell

  ...

• ClustalParser

  1.9 3.9 Haskell

  Libary for parsing Clustal tools output

• StockholmAlignment

  1.2 6.3 Haskell

  Libary for Stockholm aligmnent format

• ViennaRNAParser

  1.2 2.4 Haskell

  Libary for parsing ViennaRNA package output

• memexml

  1.2 0.0 Haskell

  Library for reading Meme XML output

• mmtf

  1.2 3.2 Haskell

  Macromolecular Transmission Format implementation

• MutationOrder

  0.8 7.3 Haskell

  Most likely order of mutation events in RNA

• rank-product

  0.8 4.1 Haskell

  Find the rank product of a data set.

• Gene-CluEDO

  0.8 6.0 Haskell

  Hox gene clustering