10

8

6

4

2


8.4
0.0

7.7
1.8

7.3

3.2

7.1
0.0

6.8
0.0

6.3
0.0

32 Bioinformatics packages and projects

  • hemokit

    8.4 0.0 Haskell
    Haskell library for the Emotiv EEG, inspired by the Emokit code
  • cobot

    7.7 1.8 Haskell
    Computational biology toolkit to collaborate with researchers in constructive protein engineering
  • InfluxDB 3 OSS is now GA. Transform, enrich, and act on time series data directly in the database. Automate critical tasks and eliminate the need to move data externally. Download now.
    Promo www.influxdata.com
    InfluxDB Logo
  • cobot-io

    7.3 3.2 Haskell
    Biological data file formats and IO
  • hPDB

    7.1 0.0 Haskell
    PDB parser in Haskell
  • samtools

    6.8 0.0 C
    DISCONTINUED. [Moved to: https://github.com/ingolia/SamTools]
  • RNAlien

    6.3 0.0 Haskell
    RNAlien - unsupervised RNA family model construction
  • phybin

    6.2 0.0 Haskell
    Binning (Newick) Phylogenetic Trees by Topology
  • bioinformatics-toolkit

    5.5 0.0 Haskell
    A collection of bioinformatics algorithms
  • BlastHTTP

    5.2 0.0 Haskell
    Haskell cabal libary for submission and result retrieval from the NCBI Blast REST webservice
  • Genbank

    5.2 0.0 Haskell
    Genbank format tools and parser
  • vcf

    5.0 0.0 Haskell
    Haskell library to handle VCF (Variant Call Format) files
  • cobot-tools

    5.0 3.6 Haskell
    DISCONTINUED. Biological data file formats and IO
  • FormalGrammars

    4.9 0.0 Haskell
    Context-free and linear grammars in Haskell (parsing, pretty-printing, embedded DSL)
  • cmv

    4.8 0.0 Haskell
    Visualize HMMs, CMs and their comparisons
  • EntrezHTTP

    4.4 0.0 Haskell
    Haskell cabal libary for submission and result retrieval from the NCBI Entrez REST webservice
  • TaxonomyTools

    4.1 0.0 Haskell
    Tools to process and visualize NCBI taxonomy data
  • SelectSequencesFromMSA

    3.9 0.0 Haskell
    Tool to select representative sequences from a multiple sequence alignment
  • Taxonomy

    3.8 0.0 Haskell
    Haskell cabal Taxonomy libary contains tools, parsers, datastructures and visualisation for the NCBI (National Center for Biotechnology Information) Taxonomy datasources.
  • ClustalParser

    3.2 0.0 Haskell
    Parse output of Clustal tools
  • ViennaRNAParser

    3.1 0.0 Haskell
    Libary for parsing ViennaRNA package output
  • StockholmAlignment

    2.9 0.0 Haskell
    Libary containing parsing and visualisation functions and datastructures for Stockholm aligmnent format.
  • BioHMM

    2.8 0.0 Haskell
    Libary containing parsing and visualisation functions and datastructures for Hidden Markov Models in HMMER3 format.
  • memexml

    2.8 0.0 Haskell
    Haskell cabal libary for parsing Meme motif finder xml output
  • Forestry

    1.9 0.0 Haskell
    Science and craft of forests
  • ADPfusionForest

    1.7 0.0 Haskell
    Dynamic programming on tree and forest structures
  • Gene-CluEDO

    1.6 0.0 Haskell
    Gene Cluster Evolution Determined Order
  • uniprot-kb

    1.3 0.0 Haskell
    UniProt-KB format parser
  • MutationOrder

    1.3 0.0 Haskell
    most likely order of mutation events in RNA
  • rank-product

    1.2 0.0 Haskell
    Collects the functions pertaining to finding the rank product of a data set as well as the associated p-value.
  • seqloc

    1.2 0.0 Haskell
    Bio.SeqLoc
  • mmtf

    0.7 0.0 Haskell
    MMTF for Haskell
  • bio-sequence

    - -
    DISCONTINUED. Initial project template from stack

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