10

8

6

4

2


8.3
0.0
hemokit

6.8
0.7
hPDB

6.6
0.0
samtools

5.7

7.4
RNAlien

5.2

6.2
bioinformatics-toolkit

4.8

3.1
phybin

27 Bioinformatics packages and projects

  • hemokit

    8.3 0.0 Haskell
    Haskell port of the Emokit EEG project

  • hPDB

    6.8 0.7 Haskell
    Protein Databank file format library

  • samtools

    6.6 0.0 C
    Binding to the C samtools library

  • RNAlien

    5.7 7.4 Haskell
    Unsupervized construction of RNA family models

  • bioinformatics-toolkit

    5.2 6.2 Haskell
    A collection of bioinformatics tools

  • phybin

    4.8 3.1 Haskell
    ...

  • EntrezHTTP

    4.6 3.6 Haskell
    Libary to interface with the NCBI Entrez REST service.

  • vcf

    4.3 1.3 Haskell
    A package to parse VCF files inspired in similar python libraries

  • Genbank

    4.3 0.0 Haskell
    Libary for processing the NCBI genbank format

  • BlastHTTP

    4.1 2.4 Haskell
    Libary to interface with the NCBI blast REST interface

  • cmv

    3.8 0.0 Haskell
    Detailed visualization of CMs, HMMs and their comparisions

  • FormalGrammars

    3.5 0.0 Haskell
    (Context-free) grammars in formal language theory

  • SelectSequencesFromMSA

    3.2 2.4 Haskell
    ...

  • TaxonomyTools

    2.5 3.7 Haskell
    Tool for parsing, processing, comparing and visualizing taxonomy data

  • Taxonomy

    2.1 0.0 Haskell
    Libary for parsing, processing and vizualization of taxonomy data

  • seqloc

    2.1 0.0 Haskell
    Handle sequence locations for bioinformatics

  • BioHMM

    1.8 0.0 Haskell
    Libary for Hidden Markov Models in HMMER3 format.

  • mmtf

    1.8 4.0 Haskell
    Macromolecular Transmission Format implementation

  • ClustalParser

    1.8 0.0 Haskell
    Libary for parsing Clustal tools output

  • StockholmAlignment

    1.3 0.0 Haskell
    Libary for Stockholm aligmnent format

  • ViennaRNAParser

    1.3 0.0 Haskell
    Libary for parsing ViennaRNA package output

  • memexml

    1.3 0.0 Haskell
    Library for reading Meme XML output

  • ADPfusionForest

    1.1 0.0 Haskell
    Dynamic programming on tree and forest structures

  • Forestry

    1.1 0.0 Haskell
    Comparison of trees and forests.

  • Gene-CluEDO

    1.1 0.0 Haskell
    Hox gene clustering

  • rank-product

    0.8 0.9 Haskell
    Find the rank product of a data set.

  • MutationOrder

    0.8 0.0 Haskell
    Most likely order of mutation events in RNA
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