10

8

6

4

2


8.5
0.0

6.8
0.0

6.1

2.8

5.7

4.2

4.9
0.2

4.9

2.3
vcf

27 Bioinformatics packages and projects

  • hemokit

    8.5 0.0 Haskell
    Haskell port of the Emokit EEG project
  • samtools

    6.8 0.0 C
    Binding to the C samtools library
  • hPDB

    6.1 2.8 Haskell
    Protein Databank file format library
  • RNAlien

    5.7 4.2 Haskell
    Unsupervized construction of RNA family models
  • Genbank

    4.9 0.2 Haskell
    Libary for processing the NCBI genbank format
  • vcf

    4.9 2.3 Haskell
    A package to parse VCF files inspired in similar python libraries
  • bioinformatics-toolkit

    4.7 2.7 Haskell
    A collection of bioinformatics tools
  • BlastHTTP

    4.4 0.0 Haskell
    Libary to interface with the NCBI blast REST interface
  • EntrezHTTP

    4.4 2.2 Haskell
    Libary to interface with the NCBI Entrez REST service.
  • phybin

    4.4 0.0 Haskell
    ...
  • cmv

    3.7 8.1 Haskell
    Detailed visualization of CMs, HMMs and their comparisions
  • FormalGrammars

    3.7 2.4 Haskell
    (Context-free) grammars in formal language theory
  • Taxonomy

    2.4 3.8 Haskell
    Libary for parsing, processing and vizualization of taxonomy data
  • TaxonomyTools

    2.4 0.5 Haskell
    Tool for parsing, processing, comparing and visualizing taxonomy data
  • BioHMM

    2.0 5.6 Haskell
    Libary for Hidden Markov Models in HMMER3 format.
  • SelectSequencesFromMSA

    2.0 3.0 Haskell
    ...
  • ClustalParser

    2.0 1.8 Haskell
    Libary for parsing Clustal tools output
  • seqloc

    2.0 0.0 Haskell
    Handle sequence locations for bioinformatics
  • memexml

    1.4 0.0 Haskell
    Library for reading Meme XML output
  • mmtf

    1.4 2.4 Haskell
    Macromolecular Transmission Format implementation
  • StockholmAlignment

    1.4 4.6 Haskell
    Libary for Stockholm aligmnent format
  • ViennaRNAParser

    1.4 1.5 Haskell
    Libary for parsing ViennaRNA package output
  • Gene-CluEDO

    1.2 5.7 Haskell
    Hox gene clustering
  • ADPfusionForest

    1.2 3.7 Haskell
    Dynamic programming on tree and forest structures
  • Forestry

    0.9 4.3 Haskell
    Comparison of trees and forests.
  • rank-product

    0.9 3.0 Haskell
    Find the rank product of a data set.
  • MutationOrder

    0.9 7.5 Haskell
    Most likely order of mutation events in RNA

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