Taxonomy alternatives and similar packages
Based on the "Bioinformatics" category.
Alternatively, view Taxonomy alternatives based on common mentions on social networks and blogs.
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cobot
Computational biology toolkit to collaborate with researchers in constructive protein engineering -
BlastHTTP
Haskell cabal libary for submission and result retrieval from the NCBI Blast REST webservice -
EntrezHTTP
Haskell cabal libary for submission and result retrieval from the NCBI Entrez REST webservice -
StockholmAlignment
Libary containing parsing and visualisation functions and datastructures for Stockholm aligmnent format. -
BioHMM
Libary containing parsing and visualisation functions and datastructures for Hidden Markov Models in HMMER3 format. -
rank-product
Collects the functions pertaining to finding the rank product of a data set as well as the associated p-value.
InfluxDB high-performance time series database

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README
Taxonomy

Haskell cabal Taxonomy libary contains tools, parsers, datastructures and visualisation for the NCBI (National Center for Biotechnology Information) Taxonomy datasources.
It can utilize information from the Entrez REST interface (via EntrezHTTP, as well as from the files of the Taxonomy database dump.
Input data is parsed into a FGL based datastructure, which enables a wealth of processing steps like node distances, retrieval of parent nodes or extraction of subtrees.
Trees can be visualised via dot-format (graphviz) or via json-format (d3js).