vcf alternatives and similar packages
Based on the "Bioinformatics" category.
Alternatively, view vcf alternatives based on common mentions on social networks and blogs.
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cobot
Computational biology toolkit to collaborate with researchers in constructive protein engineering -
BlastHTTP
Haskell cabal libary for submission and result retrieval from the NCBI Blast REST webservice -
EntrezHTTP
Haskell cabal libary for submission and result retrieval from the NCBI Entrez REST webservice -
Taxonomy
Haskell cabal Taxonomy libary contains tools, parsers, datastructures and visualisation for the NCBI (National Center for Biotechnology Information) Taxonomy datasources. -
BioHMM
Libary containing parsing and visualisation functions and datastructures for Hidden Markov Models in HMMER3 format. -
StockholmAlignment
Libary containing parsing and visualisation functions and datastructures for Stockholm aligmnent format. -
rank-product
Collects the functions pertaining to finding the rank product of a data set as well as the associated p-value.
SaaSHub - Software Alternatives and Reviews
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README
VCF
It's a haskell library inspired by its counterpart in python. It is still in early development state so don't expect it to be ready for every VCF file you throw at it.
If you have any contribution or suggestion, please open an issue or a pull request.
MIT LICENSE
*Note that all licence references and agreements mentioned in the vcf README section above
are relevant to that project's source code only.