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Monthly Downloads: 104
Programming language: Haskell
License: LicenseRef-GPL
Latest version: v2.4.0

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README

Genbank

Hackage Build Status

Haskell cabal Genbank libary contains tools, parser and datastructures for the NCBI (National Center for Biotechnology Information) Genbank format. For more information on genbank refer to:

http://www.ncbi.nlm.nih.gov/genbank/

For a sample genbank record see:

http://www.ncbi.nlm.nih.gov/Sitemap/samplerecord.html

Datastructures for Genbank format (GenbankData.hs)

Contains Haskell datastructures for Genbank format and for contained features, subfeatures

Parse Genbank format (GenbankParser.hs)

Contains Haskell functions to parse Genbank format from files or internal Strings.

Tools for processing Genbank (GenbankTools)

Contains Haskell functions to extract nucleotide sequences for features