ViennaRNAParser alternatives and similar packages

Based on the "Bioinformatics" category.
Alternatively, view ViennaRNAParser alternatives based on common mentions on social networks and blogs.

hemokit

8.4 0.0 ViennaRNAParser VS hemokit

Haskell library for the Emotiv EEG, inspired by the Emokit code
cobot

7.7 0.0 ViennaRNAParser VS cobot

Computational biology toolkit to collaborate with researchers in constructive protein engineering

Static code analysis for 29 languages.

Your projects are multi-language. So is SonarQube analysis. Find Bugs, Vulnerabilities, Security Hotspots, and Code Smells so you can release quality code every time. Get started analyzing your projects today for free.

Promo www.sonarqube.org

cobot-io

7.3 0.0 ViennaRNAParser VS cobot-io

Biological data file formats and IO
hPDB

7.2 0.0 ViennaRNAParser VS hPDB

PDB parser in Haskell
samtools

6.8 0.0 ViennaRNAParser VS samtools

[Moved to: https://github.com/ingolia/SamTools]
RNAlien

6.6 0.0 ViennaRNAParser VS RNAlien

RNAlien - unsupervised RNA family model construction
Genbank

5.6 0.0 ViennaRNAParser VS Genbank

Genbank format tools and parser
BlastHTTP

5.4 0.0 ViennaRNAParser VS BlastHTTP

Haskell cabal libary for submission and result retrieval from the NCBI Blast REST webservice
bioinformatics-toolkit

5.4 0.0 ViennaRNAParser VS bioinformatics-toolkit

A collection of bioinformatics algorithms
cmv

5.3 0.0 ViennaRNAParser VS cmv

Visualize HMMs, CMs and their comparisons
phybin

5.2 0.0 ViennaRNAParser VS phybin

Binning (Newick) Phylogenetic Trees by Topology
FormalGrammars

5.1 0.0 ViennaRNAParser VS FormalGrammars

Context-free and linear grammars in Haskell (parsing, pretty-printing, embedded DSL)
EntrezHTTP

5.1 0.0 ViennaRNAParser VS EntrezHTTP

Haskell cabal libary for submission and result retrieval from the NCBI Entrez REST webservice
cobot-tools

5.0 3.6 ViennaRNAParser VS cobot-tools

Biological data file formats and IO
vcf

5.0 0.0 ViennaRNAParser VS vcf

Haskell library to handle VCF (Variant Call Format) files
TaxonomyTools

4.3 0.0 ViennaRNAParser VS TaxonomyTools

Tools to process and visualize NCBI taxonomy data
Taxonomy

4.1 0.0 ViennaRNAParser VS Taxonomy

Haskell cabal Taxonomy libary contains tools, parsers, datastructures and visualisation for the NCBI (National Center for Biotechnology Information) Taxonomy datasources.
SelectSequencesFromMSA

4.0 0.0 ViennaRNAParser VS SelectSequencesFromMSA

Tool to select representative sequences from a multiple sequence alignment
ClustalParser

3.1 0.0 ViennaRNAParser VS ClustalParser

Parse output of Clustal tools
BioHMM

2.9 0.0 ViennaRNAParser VS BioHMM

Libary containing parsing and visualisation functions and datastructures for Hidden Markov Models in HMMER3 format.
memexml

2.9 0.0 ViennaRNAParser VS memexml

Haskell cabal libary for parsing Meme motif finder xml output
StockholmAlignment

2.8 0.0 ViennaRNAParser VS StockholmAlignment

Libary containing parsing and visualisation functions and datastructures for Stockholm aligmnent format.
seqloc

2.4 0.0 ViennaRNAParser VS seqloc

Bio.SeqLoc
Forestry

2.4 0.0 ViennaRNAParser VS Forestry

Science and craft of forests
Gene-CluEDO

2.2 0.0 ViennaRNAParser VS Gene-CluEDO

Gene Cluster Evolution Determined Order
ADPfusionForest

2.1 0.0 ViennaRNAParser VS ADPfusionForest

Dynamic programming on tree and forest structures
MutationOrder

1.8 0.0 ViennaRNAParser VS MutationOrder

most likely order of mutation events in RNA
uniprot-kb

1.5 0.0 ViennaRNAParser VS uniprot-kb

UniProt-KB format parser
rank-product

1.1 0.0 ViennaRNAParser VS rank-product

Collects the functions pertaining to finding the rank product of a data set as well as the associated p-value.
mmtf

0.6 0.0 ViennaRNAParser VS mmtf

MMTF for Haskell
bio-sequence

- - ViennaRNAParser VS bio-sequence

Initial project template from stack